Detailed Information

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Basic Information

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Title Content
iBAD ID iBAD_0000328
Karyotype Trisomy 21
Type Sci-ATAC
Diseases Down syndrome
Organism Mus musculus
Tissue Brain
Cell Line Cerebral cortex
Platform GPL19057, GPL19415
Accession GSE127257
GEO Title Single cell ATAC-seq identifies broad changes in neuronal abundance and gene regulation in Down Syndrome
PMID -
Article Title -
Author -
GEO Link https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE127257
Pub Link -
FTP Download ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE127nnn/GSE127257/
SRA Run Selector https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA524534
SRP -

Paper

This item was derived from the following paper.

Cluster

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Marker Gene

The dotplot illustrates the read coverage of marker genes for each cluster.

Heatmap

The heatmap shows the top 20 transcription factor motifs in each cell type in WT and Ts mice, click the options that you'd like to display.

Ontology

The result of gene ontology and disease ontology analysis is shown as follows. Select the option that you'd like to display.

ShenZhen, Guangdong province, China