Detailed Information

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Basic Information

The table below details the source and basic information of this item.

Title Content
iBAD ID iBAD_0000246
Karyotype Trisomy 8
Type DNA microarray
Diseases Warkany syndrome 2
Organism Homo sapiens
Tissue Bone marrow
Cell Line Hematopoietic cell
Platform GPL570
Accession GSE19429
GEO Title Expression data from bone marrow CD34+ cells of MDS patients and healthy controls
PMID 20220779
Article Title Deregulated gene expression pathways in myelodysplastic syndrome hematopoietic stem cells
Author Pellagatti A, Cazzola M, Giagounidis A, Perry J et al.
GEO Link https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE19429
Pub Link https://www.ncbi.nlm.nih.gov/pubmed/20220779
FTP Download ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE19nnn/GSE19429/
SRA Run Selector -
SRP -

Differentially Expressed Genes

The gene expression matrix, up- and down-regulated gene list are provided. Click the three following options to download the corresponding list.

ID Statistic DM P-value P-adj
1007_s_at -1.86903580816553 -0.520259805385645 0.0700045500574543 0.831448711713326
1053_at -0.134235759983627 -0.0232271508496016 0.893985095219277 0.985015872316421
121_at -0.358455156943623 -0.0702082840064495 0.722155856697074 0.954838021645513
1294_at -1.30406832933477 -0.454200703874175 0.200721888054603 0.833278621341276
1405_i_at 0.629239597638796 0.74219601486109 0.533278148465973 0.914271248562696
1438_at -0.844401327715844 -0.139792101315395 0.404180159998816 0.880589628604976
1487_at 1.43252112669378 0.204941019540656 0.160866416700759 0.832513637904683
1552256_a_at -0.625158698932718 -0.172709239222601 0.53592191065451 0.915358648509931
1552257_a_at 1.35946304586014 0.342417611423905 0.18269477633035 0.832513637904683
1552258_at -0.278344127879885 -0.0592629820160813 0.782386069700006 0.967039381641696
1552263_at 0.0247458782663205 0.00596330185475846 0.980398213094091 0.996343943898677
1552264_a_at 0.262972297102048 0.040236238668319 0.794113833992789 0.967827429841531
1552274_at 0.551447591605512 0.112868105252474 0.584830605481767 0.925513695274666
1552275_s_at -0.397728353753243 -0.121256801155032 0.693245952862528 0.948343021085802
1552277_a_at 0.197745200808048 0.0829454343702478 0.844388443664985 0.976365481376925
1552278_a_at 0.526965481471649 0.071571968127695 0.601541890150373 0.930394885500758
1552279_a_at 1.5168100827181 0.218093567621102 0.138295748415147 0.831448711713326
1552280_at 0.986925723190868 1.36836693282987 0.330452991979836 0.863470941465677
1552283_s_at -0.795636441334349 -0.159692804158697 0.431606595073242 0.890153684536653
1552287_s_at -0.949130611043146 -0.368741481867806 0.34906223650434 0.865177105700599
1552291_at -0.960809712170645 -0.317816863240038 0.343238968060581 0.865177105700599
1552302_at -0.864488921115568 -0.442284771172472 0.393205819775512 0.878273015738138
1552303_a_at -0.766268819133642 -0.245175630356548 0.448653900064308 0.894411910222093
1552304_at -0.106345018334307 -0.0206754300817336 0.915915821750861 0.987209596109403
1552306_at 0.0034530231810666 0.000894343548120347 0.997264498319715 0.999515775769949
1552309_a_at 0.837130848357675 0.597549526672267 0.408198901256115 0.883385379933481
1552310_at -0.396929322314591 -0.0951388411409804 0.693829694917505 0.948376315233389
1552312_a_at 1.10639941348399 0.299421117967112 0.276100538978932 0.849647485707143
1552314_a_at -1.48475367867453 -0.239833236915358 0.146560616741516 0.832448048150727
1552315_at 1.81485674483054 0.850059711215109 0.0781239295614861 0.831448711713326
1552316_a_at 1.27177376493802 0.798037727411928 0.211839466468321 0.833278621341276
1552318_at 0.845164381203052 0.292368510075356 0.403759820595363 0.880268753223601
1552323_s_at -0.864721835255563 -0.211115868564798 0.393079687102169 0.878273015738138
1552326_a_at 0.958452431215514 0.144743167960533 0.344409077652616 0.865177105700599
1552329_at -0.858590964432541 -0.28372437462239 0.396408329086207 0.87969822204383
1552330_at 1.59235686506282 0.43604427657935 0.120297149005509 0.831448711713326
1552332_at 1.08757071217895 0.161992838383661 0.284217657708015 0.853122135783767
1552335_at -0.31923207125066 -0.0603724194110375 0.75144812591599 0.959314975959163
1552338_at 0.753252932144228 0.12440655169109 0.456335221593905 0.896050842658211
1552343_s_at -0.458340832447164 -0.144287425708554 0.649540908101714 0.939169944443672
1552344_s_at 0.350624864525635 0.130033051635329 0.727971405480614 0.954838021645513
1552347_at -0.346040718540738 -0.146288286791106 0.731383671141718 0.955801996337408
1552348_at 0.126925219917854 0.0327597163539872 0.899725987106266 0.985506224631647
1552354_at 0.886592565943598 0.210075680665552 0.381349939928575 0.875954324848206
1552362_a_at -0.392772931783932 -0.102428267580081 0.696869247367809 0.949631283991685
1552364_s_at -1.42636041398198 -0.409164491891111 0.162624019090801 0.832513637904683
1552370_at 1.65433556984892 0.376775161746782 0.107001517656554 0.831448711713326
1552386_at 1.52950377045434 0.712781115102166 0.1351283410841 0.831448711713326
1552388_at -0.85318851147269 -0.111238241225998 0.39935615936906 0.879729413465848
1552395_at -0.670172478967192 -0.174590355207955 0.507145875267649 0.907290242367346
1552398_a_at -1.0494670809964 -0.608252565140143 0.301156095316876 0.858333403609904
1552410_at -0.513512613948875 -0.0776208185801766 0.610819447150276 0.932403408298166
1552411_at -0.883572729213335 -0.218739235368059 0.382956082256376 0.875975635043977
1552417_a_at 0.475996550527095 0.0834311362786808 0.63703471826146 0.936488755065356
1552422_at 0.383218494512676 0.0993254927329144 0.70387557920332 0.951527606900511
1552423_at -2.5769904078928 -0.991513022734875 0.0143406334798342 0.817010573509489
1552426_a_at -0.0435110163627126 -0.0142698631088951 0.965541475439168 0.993831129253144
1552427_at 2.44054586247561 0.670465259377165 0.0198674523559137 0.817010573509489
1552440_at 1.36974875107016 0.576944739582168 0.179489634800649 0.832513637904683
1552449_a_at 0.615719895709765 0.429691041987751 0.542063004258533 0.917907407149731
1552472_a_at -0.046949910992875 -0.0127082951767017 0.962820026996118 0.993303750081457
1552473_at 0.408601909940304 0.0926007060166514 0.685321154931482 0.947766835516093
1552474_a_at 0.391028100170904 0.0895124466932362 0.69814675422777 0.949855270101818
1552476_s_at 0.581873139988927 0.131496960540284 0.564381534916741 0.922746355566559
1552481_s_at 0.935256065089009 0.178525163789099 0.356064755923561 0.865177105700599
1552484_at 0.431543300015894 0.0884638288892399 0.668720071819685 0.94279586333686
1552485_at 0.531316746690165 0.127098254495302 0.598555364439175 0.929634194720513
1552486_s_at 0.433352933708003 0.107457823100423 0.6674175921951 0.942158355747579
1552497_a_at 0.517105388433611 0.107781342962922 0.60833527019054 0.932170908647825
1552501_a_at 0.705610426776214 0.135519108297959 0.485100630058243 0.903087981966337
1552503_at -0.331895498079068 -0.0489627505337893 0.7419475628128 0.957932764790258
1552509_a_at -0.0914566758293011 -0.0312219274494998 0.927651177796554 0.9885509958994
1552510_at -0.313629045245491 -0.0700860153807632 0.755664397974885 0.960152109948978
1552536_at 0.104611609957481 0.0389591247885068 0.917281205327701 0.987209596109403
1552540_s_at -0.481045040827972 -0.06437459369225 0.633478219768561 0.936273928301317
1552541_at -0.483655586677105 -0.125662684520693 0.631642627530208 0.936273928301317
1552542_s_at 0.267798511134373 0.0976458058168461 0.790426352472078 0.96757562618792
1552543_a_at 2.96370981961671 0.478709920185903 0.0054376459012992 0.764645305195642
1552552_s_at -0.666205373248393 -0.338692520554908 0.509647496363096 0.907982551917522
1552553_a_at 1.85712502438333 0.948212465851181 0.0717248051406175 0.831448711713326
1552555_at -0.0803498738624279 -0.0116828954320081 0.936416686214765 0.989332344819683
1552557_a_at -0.868024757472769 -0.204712720195332 0.391293771763169 0.878214213051095
1552558_a_at 0.424969528391701 0.0688757250190806 0.673460262951768 0.943922900121188
1552559_a_at 0.827624492615993 0.166262370677984 0.413490832070073 0.885381081449492
1552579_a_at -2.29615895643866 -0.355708288135684 0.0277704251897959 0.827779908348412
1552583_s_at 0.433646899099057 0.113160404550315 0.667206109824679 0.942158355747579
1552584_at 0.38440091603045 0.097195298944535 0.703007063148209 0.951527606900511
1552586_at 0.854407844086135 0.109381653937342 0.398689634843117 0.879729413465848
1552594_at 0.670212855143695 0.103641336020948 0.507120449054276 0.907290242367346
1552596_at -0.103573577474562 -0.0152386813267658 0.918098972373738 0.98747276724864
1552610_a_at -1.26867996392407 -0.423648378027234 0.212928442440203 0.833489145101535
1552611_a_at 0.480544435918702 0.105145192278933 0.633830487218132 0.936273928301317
1552612_at -0.209871899633454 -0.0552791384156928 0.834984580396174 0.974571017409614
1552613_s_at -0.119683995792503 -0.0288113518270716 0.905417848372102 0.98586470733564
1552615_at 0.301098657013328 0.0537430959932879 0.765120848153586 0.962794624010877
1552617_a_at -0.565744448038889 -0.164776267207545 0.5751769229837 0.924904435703828
1552618_at 0.827841169828162 0.138131857879251 0.413369743606379 0.885321804263578
1552619_a_at 0.311597387140765 0.120518162953612 0.75719510431438 0.960152109948978
1552621_at -0.965240905388717 -0.405641155807521 0.341046588265055 0.864938233866547
1552622_s_at -0.793525846904302 -0.378717313645243 0.432818545712632 0.890272989337548
1552623_at -0.565413344080176 -0.135254284383374 0.575399603240975 0.924904435703828
1552625_a_at 1.00060405577434 0.26230229427858 0.323886228614883 0.861040943913273
1552626_a_at -0.892516182772433 -0.361874568481912 0.378211932300809 0.874624463594311
1552628_a_at -1.29668170861452 -0.291371071867635 0.203224785871423 0.833278621341276
1552633_at -2.52453187991864 -0.496182492867359 0.016272714904035 0.817010573509489
1552634_a_at -1.62815074085711 -0.415699508249599 0.112462864113184 0.831448711713326
1552639_at 1.2368173220739 0.210580343151918 0.224389898487941 0.836142087852706
1552641_s_at -0.137334788112859 -0.0253440325427521 0.891553189503749 0.984422366116055
1552643_at 0.635298081362103 0.147078395414873 0.529365956452152 0.914049449913139
1552644_a_at -0.691736588723851 -0.219442115283729 0.493666250060754 0.904273338537972
1552646_at 0.174333293234523 0.0399679661385415 0.862608044718409 0.980265011631661
1552648_a_at 1.48131207357394 0.261407121971411 0.147470908218419 0.832448048150727
1552651_a_at 0.44597824829454 0.0659733091606487 0.658359809291486 0.940082428175453
1552652_at -3.40240267254226 -0.716068599814497 0.00168670345630063 0.660621016329167
1552660_a_at 1.15272722359843 0.153689172077307 0.25683471779364 0.84619066574992
1552662_a_at -1.01148770460155 -0.186234131174081 0.318724922186428 0.860428439937127
1552664_at 0.833482012890745 0.265122952532787 0.41022511423087 0.883646183835737
1552667_a_at -0.905963206596826 -0.228738254648772 0.371150224548535 0.873276261612056
1552680_a_at 0.733892777836245 0.245534915882669 0.46790216178368 0.898352613230551
1552689_at -0.0958702427111949 -0.0138016048433247 0.924170462105797 0.988159478057415
1552691_at 0.751522527402438 0.190225932393065 0.457362199808043 0.896220752266273
1552698_at -0.0858470695684712 -0.0158684111372667 0.932077214609081 0.988576565091344
1552701_a_at 1.47685269424375 0.885866244427421 0.148657096156804 0.832513637904683
1552703_s_at 1.34881417362467 0.553440580038151 0.186059536970842 0.832853882220031
1552711_a_at 1.75389802410197 0.34045118971472 0.0882018364975512 0.831448711713326
1552713_a_at 0.659550147419638 0.149745054912265 0.513859313690683 0.909491382548067
1552716_at -1.04833629929251 -0.249646966979623 0.301669275818497 0.858333403609904
1552719_at -1.18906058142835 -0.425958624733722 0.24242066237727 0.838992664557829
1552724_at 1.26635837700731 0.243417554996421 0.213748374876506 0.833954308189371
1552729_at -1.33503088839768 -0.526736891582165 0.190485394868201 0.832967210563009
1552733_at -1.50894585367049 -0.53779139053597 0.140287840870254 0.831448711713326
1552734_at -0.874155224620292 -0.211227669703065 0.38799262943319 0.877458448177353
1552739_s_at -1.66083718632111 -0.410683864615504 0.105679981200817 0.831448711713326
1552749_a_at 0.472291526672823 0.112425962433707 0.639650355776904 0.937239806887883
1552751_a_at 0.291159182078441 0.0395851075671576 0.772648134679924 0.963917999522749
1552755_at 1.5679774270376 0.253029173169923 0.125884169023658 0.831448711713326
1552772_at 0.657713831292202 0.187952725713971 0.515024760138383 0.910125944883426
1552773_at 1.16441475490583 0.483905473145907 0.252131810233457 0.843611225368799
1552774_a_at -0.857841769851916 -0.16951333025361 0.396816304309402 0.87969822204383
1552787_at 0.920163608950592 0.335101946191593 0.363786170631323 0.869801428202748
1552789_at 0.747673577275798 0.255216225828358 0.45965136295139 0.897036776988083
1552790_a_at 0.877472921250216 0.229448666959108 0.386213516338242 0.877261262829127
1552798_a_at 1.33508015763886 0.59240620689007 0.19046943153407 0.832967210563009
1552800_at -0.319160082927116 -0.0690764185199839 0.751502248320363 0.959314975959163
1552803_a_at -1.24059860842235 -0.270663405073686 0.223006116034707 0.836142087852706
1552807_a_at 1.24165849652004 0.304606436610296 0.222619389618815 0.836142087852706
1552813_at 0.191611957722478 0.0318677543901176 0.849153494113078 0.977224366940039
1552819_at -0.961343293919361 -0.138508217867733 0.342974476389217 0.865177105700599
1552822_at 0.7486248798199 0.172071107187536 0.459084953822729 0.896727720342677
1552828_at 0.578622556469937 0.074725382480747 0.566549036000507 0.923737759412335
1552829_at 0.879636110603089 0.207412094746621 0.385056310209145 0.876690144502306
1552834_at -1.02412168768498 -0.14667447725119 0.312804382544255 0.859362107103038
1552836_at -0.262125033160696 -0.0452175703966109 0.794761686605486 0.967827429841531
1552841_s_at 0.221352651924393 0.0318317183697685 0.826104232469846 0.973226939912493
1552845_at -1.01584880698237 -0.167432346997268 0.316672625504625 0.860428439937127
1552846_s_at 1.01373083667463 0.502392436071281 0.317668191555196 0.860428439937127
1552853_at 1.42907598309841 0.236861440994415 0.1618474347261 0.832513637904683
1552865_a_at -1.29008357412532 -0.284008425503962 0.205480496618143 0.833278621341276
1552867_at -1.14646664390132 -0.431781462392995 0.259379873160694 0.84619066574992
1552872_at 0.576042882577516 0.132843923086751 0.568272131710812 0.923863403374467
1552873_s_at 0.133503867840508 0.0237372499638209 0.894559586933944 0.98511209179473
1552889_a_at 0.309457801344309 0.0681432222253955 0.758808201105116 0.960216018391384
1552892_at -0.413315891067831 -0.0865719873674458 0.681896668929547 0.946942812236126
1552908_at 1.56248243120575 0.646860326192689 0.127172151831341 0.831448711713326
1552910_at 0.477264624542591 0.11089314165482 0.636140575892709 0.936488755065356
1552915_at 0.00655466689006172 0.00109617833536912 0.994807388789088 0.999003446104174
1552917_at 0.378400920579106 0.0590126770216282 0.707418355901484 0.95273655038531
1552921_a_at 0.429936073256278 0.147971785485269 0.669877742571863 0.94296982982551
1552927_at -0.701601521140746 -0.120984004616758 0.487567044806492 0.904254241143804
1552928_s_at 0.0543366899720355 0.0164978865094945 0.956975899885178 0.992835058222796
1552930_at 0.215450854205449 0.058865861844847 0.830666446182515 0.973630273176094
1552937_s_at 0.739468168655656 0.178332428598967 0.464553809209172 0.898352613230551
1552946_at 1.88712997245955 0.460468883199257 0.0674588787846694 0.831448711713326
1552947_x_at 2.39122563275911 0.514488922454274 0.022301820182457 0.817558704124588
1552977_a_at 0.457171722160142 0.146717655775198 0.650372733427743 0.939169944443672
1552978_a_at -0.856448733578041 -0.172263796338787 0.397575587016176 0.879729413465848
1552986_at 0.00130440868445466 0.00046319882396606 0.998966639314694 0.999587635585284
1552995_at -0.86023977394313 -0.146565055000359 0.395511397846902 0.879599610729999
1553015_a_at 0.891584034549265 0.131434385360467 0.378704630547603 0.875008768316894
1553016_at 0.402692232602566 0.0717906966441513 0.689623798415885 0.947929821607782
1553030_a_at 1.51135445771918 0.201506429718427 0.139675284026803 0.831448711713326
1553032_at 0.198821765125627 0.0289958501186813 0.843552644549316 0.975918801228599
1553034_at -0.334298307249011 -0.0671168261163322 0.740149457483632 0.957505140720389
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