Detailed Information

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Basic Information

The table below details the source and basic information of this item.

Title Content
iBAD ID iBAD_0000243
Karyotype Trisomy 8
Type DNA microarray
Diseases Warkany syndrome 2
Organism Homo sapiens
Tissue Bone marrow
Cell Line AML blasts
Platform GPL570
Accession GSE52478
GEO Title The DNA Double-Strand Break Response Is AbNrmal in Myeloblasts From Patients With Therapy-Related Acute Myeloid Leukemia [Affymetrix]
PMID 24304937
Article Title The DNA double-strand break response is abNrmal in myeloblasts from patients with therapy-related acute myeloid leukemia
Author Jacoby MA, de Jesus Pizarro R, Shao J, Koboldt D, Fulton RS, Zhao G, Wilson RK, Walter MJ
GEO Link https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52478
Pub Link https://www.ncbi.nlm.nih.gov/pubmed/24304937
FTP Download ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE52nnn/GSE52478/
SRA Run Selector -
SRP -

Differentially Expressed Genes

The gene expression matrix, up- and down-regulated gene list are provided. Click the three following options to download the corresponding list.

ID Statistic DM P-value P-adj
1007_s_at -0.420750874124702 -0.0718513222760295 0.681374076748395 0.883456815749843
1053_at 0.877127189569424 0.228616096039489 0.397637920140703 0.738936370166569
117_at 0.702612938459782 0.514473854015003 0.495701474105186 0.794176615329156
1294_at -2.47972381376034 -0.661637378472596 0.0289727427992375 0.390216527753405
1405_i_at 1.17218684760964 1.27829416074868 0.263868301447291 0.65285858901365
1487_at 3.80980720632573 0.629521673674739 0.00248509568729201 0.301675187391951
1494_f_at -0.222100641949265 -0.0324322254031815 0.827970528308242 0.943307567765302
1552256_a_at 0.612875071226355 0.168101136206023 0.551397566126542 0.823930510031315
1552257_a_at 2.39775199135084 0.610460780495733 0.0336563257803021 0.40261593555373
1552258_at -0.268533851333959 -0.0601450803555883 0.792849212370534 0.930681661648095
1552263_at 2.31037706961211 0.780519792722744 0.0394492408540417 0.411919391187667
1552264_a_at 2.34669321587367 0.708556067324412 0.0369339022183262 0.409534451502338
1552266_at 1.87779749421819 0.290067316526525 0.0849194871778249 0.480832231792987
1552274_at -0.489982313628679 -0.178947670599336 0.632982008489067 0.862655032669571
1552275_s_at 0.404482972891196 0.126142970489889 0.692974153195659 0.889600312168025
1552277_a_at -1.4578204247507 -0.412089764852753 0.170559422663929 0.577470005612058
1552280_at -0.101705816987872 -0.0149280093992612 0.920669876395074 0.976249292186426
1552283_s_at -0.145629490535124 -0.116568399952993 0.886631501967745 0.965055996840246
1552286_at 0.54290293738604 0.165041274495856 0.597136381250821 0.846410492001678
1552287_s_at 0.237226208879016 0.0379154028422564 0.816482926495199 0.939192229853732
1552289_a_at -0.126549920764171 -0.0271450296536964 0.90139233366304 0.970834801682552
1552291_at 1.18519069445222 0.244230708614714 0.258882596751375 0.648214014505663
1552299_at -1.11041891234098 -0.200545861071942 0.288573814017672 0.671533473729509
1552301_a_at -1.41166967473273 -0.300459996814349 0.18344785421082 0.587819270243634
1552302_at -1.3483335719731 -0.766410158207966 0.20245045604088 0.606290705324174
1552303_a_at -1.80991951392541 -0.61105560965003 0.0954057726872253 0.492746364478414
1552304_at 1.28441780142668 0.363415488523058 0.223238224308236 0.623807620638365
1552306_at 1.54323090056531 0.504646430541349 0.148724699684876 0.555161256272461
1552307_a_at -0.267753182833047 -0.0847880550105611 0.793436033280005 0.930838548167244
1552309_a_at 0.690038070499302 0.489519980131128 0.503297509061133 0.796921744143206
1552310_at -1.10587189364564 -0.143116649441517 0.290460060126423 0.672479295601693
1552312_a_at 1.42469605766898 0.303029026689516 0.179729852201025 0.58480735750729
1552314_a_at 0.381581513341973 0.0812955250750624 0.709442519306942 0.896687531577271
1552315_at 0.103367056153934 0.0663009082818311 0.919379065685935 0.975919948982279
1552316_a_at 0.400804501842743 0.364818393751759 0.695608585675098 0.890345295129511
1552318_at -0.396643781516788 -0.257272302541751 0.698593400174181 0.892059080862149
1552323_s_at -2.05990887373011 -0.551701234160737 0.0617808109639391 0.447832976952833
1552327_at -1.81669199873934 -0.332928172261445 0.0943092020417601 0.491712133636713
1552329_at -0.497069987735511 -0.2067979634626 0.62812149883508 0.860307418304853
1552330_at 2.30609759770148 0.801918037996995 0.0397562233069381 0.412240036802129
1552332_at -0.445006337978044 -0.0648663829689244 0.664235948006016 0.87626747200921
1552334_at -0.431941351398276 -0.130447376263918 0.673443410491033 0.88008175210691
1552335_at 0.655791824788732 0.215510303719765 0.524332617951603 0.808628236803386
1552343_s_at 1.50132720501164 0.727569066563267 0.159118403549726 0.568556180463861
1552344_s_at 0.906445560674536 0.287050099785412 0.382540762017358 0.73046559773748
1552347_at -1.39292024918857 -0.325481785860912 0.188911970107966 0.593801556348758
1552359_at 1.31335201016901 0.182926209372823 0.213622548867263 0.616172417053647
1552360_a_at 1.24615431115871 0.400173389580009 0.236487278458954 0.633264318529698
1552362_a_at -0.58076748189812 -0.192072076723713 0.572143178638818 0.834558848072199
1552364_s_at -1.05100081587143 -0.42023565420225 0.313963403723507 0.69015333296362
1552370_at 0.996589329735544 0.272096265849561 0.338635882117545 0.706926781307731
1552375_at -0.33929955857782 -0.079806715061884 0.740248193975397 0.90778744557058
1552378_s_at 0.994343396455771 0.208270650011608 0.339683760722797 0.707324319406752
1552386_at -0.151857333295215 -0.0427757574320875 0.881822669082271 0.964396419495374
1552388_at 1.87966817036828 1.03952640722051 0.0846459407837417 0.480242784073881
1552398_a_at 0.258232499841604 0.103070078227972 0.800603162263258 0.932562253872694
1552417_a_at -1.12833142833592 -0.285851684362072 0.281233793615735 0.665860571271244
1552422_at -0.454874489427212 -0.222405390889825 0.657319068012984 0.872967374390061
1552423_at -0.25260414648085 -0.0724917295814684 0.804849143843698 0.934873260507097
1552426_a_at -0.196338316739839 -0.0455639645420138 0.847631136452244 0.952065723075484
1552427_at 0.72992094015841 0.214022821369023 0.479445715827703 0.78563038384489
1552430_at -0.363611138576942 -0.149754294737762 0.72247369993142 0.901152106593925
1552470_a_at 3.43421114994672 0.711180711796704 0.00494705072473376 0.328671939390706
1552472_a_at 0.0975409711325308 0.0219583718693723 0.923907060990421 0.977344989245901
1552474_a_at 0.0700167030325423 0.017336175399933 0.945333650606881 0.984119584995735
1552480_s_at -1.2237383501608 -0.636268857085943 0.244536105162133 0.638827403632884
1552481_s_at -1.31800179591431 -0.293853749814823 0.212109166197707 0.614718991658957
1552484_at 1.5256831583547 0.275078104492393 0.153004026235966 0.560616968507448
1552485_at 2.07990266630188 0.630981527150834 0.0596331909526897 0.446168704323103
1552486_s_at 2.83726546684361 1.11630594121944 0.0149725035501192 0.357804207814694
1552490_at 0.962637892899477 0.148425381325678 0.354727010855864 0.715163597048894
1552497_a_at 0.420058852172021 0.154203102768599 0.681865831808802 0.883650389767086
1552501_a_at 0.277121607384096 0.0887746198032602 0.786402699839357 0.927923992370187
1552511_a_at 0.181775966065079 0.0388878610246097 0.85879294263268 0.956524525594445
1552514_at -4.14731626847382 -0.590283586538205 0.00135304656190677 0.293224519201795
1552516_a_at 0.931072821640323 0.127642544228268 0.370169365218273 0.724865134597094
1552518_s_at 2.02874514009519 0.323011117789049 0.0652725141121455 0.451909551304829
1552519_at -0.266828537896678 -0.041894480476504 0.794131250747842 0.931139392650389
1552526_at 1.02897850457678 0.128487165400972 0.32378438205948 0.696231554794411
1552536_at -0.301266487459709 -0.0664388603972625 0.76836788621153 0.920100578910321
1552542_s_at -0.685443101639654 -0.187330832288154 0.506090407013285 0.798106224526845
1552552_s_at -0.0907735248128181 -0.030449198490921 0.92917016294033 0.978779433270915
1552553_a_at 2.31421030019662 1.62712685304701 0.039176194467964 0.411919391187667
1552562_at -0.437857833728073 -0.0732537171893877 0.669266843824317 0.878698914796737
1552563_a_at 0.925058964856818 0.234487639662236 0.373164254701397 0.72618901056737
1552564_at -1.658239530081 -0.291142578008775 0.123159099747614 0.527553979961638
1552569_a_at 0.482020838480538 0.0712389815734435 0.6384631537041 0.865327194423286
1552582_at -1.23922109263718 -0.307936549122155 0.238953909779833 0.635890796262363
1552584_at 0.311378198966842 0.190728252668494 0.760856194024725 0.91673384962446
1552610_a_at -1.11470269966756 -0.315449951247124 0.286805302953619 0.670117722824506
1552611_a_at -2.00796713378081 -0.666665856665295 0.0677015752247933 0.454485738003318
1552612_at -0.841760869192247 -0.152297115287117 0.416382115396251 0.748622589846319
1552613_s_at -0.45850454803126 -0.0808869957462033 0.654782922946749 0.87213312272545
1552617_a_at 1.46940990718689 0.26223957611751 0.167445603332193 0.575148809601762
1552618_at 0.0208714443390771 0.00342664228874678 0.983691238068307 0.994658046746261
1552619_a_at 1.24568291356289 0.702240278836796 0.236654341668256 0.633351313691404
1552621_at -1.00648579273141 -0.323481504470583 0.334046427809152 0.70336137460384
1552622_s_at -1.26678902137084 -0.443283952104172 0.229266201479827 0.628107043002724
1552623_at -1.01219977003286 -0.592150292411988 0.331417285846465 0.702287785761569
1552625_a_at 1.11585472382552 0.287694542546841 0.286331115106975 0.669748544909156
1552627_a_at -0.963824855743237 -0.588975258302988 0.354155394554575 0.715153670873437
1552628_a_at 0.534517431089417 0.134976583375096 0.602746525128386 0.848711292680837
1552631_a_at -0.346497747691114 -0.0608858771041954 0.734968607146709 0.905724964407097
1552632_a_at 0.678043104318475 0.152004249770043 0.510607544129293 0.800519584313859
1552633_at -0.654031795722746 -0.105595573944973 0.525427294702916 0.808903856038754
1552634_a_at -0.654134458097487 -0.147888558307888 0.525363406044077 0.808903856038754
1552639_at 2.13319886574104 0.347708296293489 0.0542448035309261 0.438412939973512
1552643_at -1.3892579397146 -0.668051021330091 0.189994935555942 0.595363978688381
1552644_a_at -0.476378110815123 -0.13355101725899 0.64236151724266 0.866873756539887
1552648_a_at 0.353052371984815 0.142039844542027 0.730173313098937 0.904202788899198
1552652_at -2.81223592458975 -0.423952674107726 0.0156842257639189 0.358734684078342
1552658_a_at 1.26030840479919 0.701152229301607 0.231514789063906 0.629612702233499
1552660_a_at 2.50513387102294 0.325204507034759 0.0276536820084255 0.384518846474727
1552664_at 1.98091294130684 0.37514242915796 0.0709899854567389 0.459457820071513
1552665_at 2.10329158065123 1.94378040957262 0.0572095174329054 0.443751568130015
1552667_a_at -1.14473589212027 -0.265100999935443 0.274637960545196 0.660669910197086
1552678_a_at 0.593562636368135 0.119447727352646 0.563825797705612 0.83047415177036
1552680_a_at -0.703704374007918 -0.283495750500618 0.495045447513001 0.793712112605836
1552682_a_at 0.324348694263411 0.100592970792902 0.751258043025058 0.911934519285188
1552690_a_at 1.34493987884169 0.897351747520693 0.2035128692362 0.606687195790517
1552691_at 0.435343623963921 0.264692432474455 0.67104027547569 0.87937024379401
1552693_at -0.958405573423436 -0.174345601158993 0.356770556838722 0.716796175780895
1552695_a_at -0.329820549476024 -0.071984401149976 0.747221766040012 0.91088336769839
1552696_at 2.06560568439848 0.720561916049975 0.0611616490924545 0.447280201416368
1552701_a_at 1.64777597144156 0.765502875227599 0.125314256566419 0.530740829113824
1552703_s_at 1.35472567965556 0.453665067006598 0.200461758134565 0.604874163541777
1552705_at 0.0326566652099684 0.00576889419326676 0.974485276671224 0.992752612434828
1552711_a_at -0.174305816895182 -0.0296158314684902 0.864531250499015 0.958460833379054
1552713_a_at -0.641167024213043 -0.195289881815622 0.533468676623972 0.813068638055696
1552715_a_at 1.76787723855214 1.39381455248644 0.102474047575823 0.500052088414474
1552717_s_at -1.65025528564388 -0.371293655065872 0.124800621022896 0.530259589609858
1552718_at 0.125387925246487 0.020042274417583 0.902292611721619 0.971223669807258
1552719_at -0.504061076102892 -0.102857941716243 0.62334499735 0.858390422356089
1552724_at -0.477617209617796 -0.107832906601049 0.641504507780154 0.866582096083856
1552733_at -0.462321410288665 -0.158038647583372 0.652121110501067 0.871065057032752
1552734_at -1.80739832280402 -0.605880303194215 0.0958169247332587 0.493501272571013
1552735_at -1.41585132008476 -0.554506414539454 0.182247375655439 0.587301298809017
1552736_a_at -0.948076156299092 -0.901889527726736 0.361793142292826 0.719125871135844
1552739_s_at 0.940719907631558 0.224577824680622 0.365400422322244 0.721604392271006
1552742_at -1.18782124572289 -0.406489300209177 0.25788304694255 0.647696328165312
1552751_a_at 0.500880060796818 0.0865852769009905 0.62551615381474 0.859383991974682
1552755_at 0.889519693999195 0.422951704613664 0.391207615565999 0.735298838050686
1552757_s_at 0.334050899965539 0.0857300674145152 0.744106625835474 0.909346887431403
1552760_at 2.24237606027944 1.16978665408214 0.0446057766024317 0.420436774561961
1552768_at -1.19059053032941 -0.162729873269375 0.256834047823144 0.646965914193613
1552772_at 1.47708228283757 0.814555640267386 0.1654108236582 0.572961238523524
1552773_at 1.72985013012826 1.31494519708919 0.1092681893936 0.509278947314319
1552787_at -0.0281915783943431 -0.0108779065944784 0.97797277834354 0.993378398034715
1552788_a_at 0.872719771635599 0.117270464596145 0.3999421246288 0.739951226304878
1552789_at 1.67129557344892 0.394076600838265 0.120515798101071 0.523624042411779
1552790_a_at 1.26220786234117 0.305302985192189 0.23085390764345 0.629155455230634
1552792_at -1.09214478660677 -0.243036891956269 0.296211263636322 0.676113413429191
1552794_a_at -0.236453871022069 -0.0512668084103431 0.817068451138594 0.939240132339701
1552798_a_at 0.0488810198788561 0.0298031442537727 0.961818271164597 0.988684931628647
1552803_a_at -0.899982623015587 -0.212700551240317 0.385834313355027 0.732191631661385
1552806_a_at 1.00370162392884 0.477113308880775 0.335332980592497 0.704408213559406
1552807_a_at 0.83854726708901 0.640776072078862 0.41811411043265 0.749345228371878
1552809_at -1.03951401094662 -0.111144797780506 0.319058122363885 0.693209554714086
1552812_a_at -0.112804661331869 -0.0213113245582637 0.912050553202163 0.974106508392077
1552822_at -0.649320892990394 -0.232842733872818 0.528363796907454 0.810282347779429
1552829_at -1.23229171708154 -0.332248965369924 0.241439595086067 0.637042186048908
1552835_at 0.315677216203703 0.0454218442510737 0.757670225852537 0.915015842331516
1552845_at 0.0450386855025603 0.00816417758074461 0.964817287267349 0.989717504561634
1552846_s_at -0.0376377944993921 -0.00732849634314903 0.970595368151665 0.991191626836103
1552848_a_at 0.798088725517809 0.104455220561999 0.440327555425473 0.763611026275125
1552849_at -0.289191479456726 -0.0689227448112093 0.77737027665928 0.924680180343926
1552867_at -0.699459061404491 -0.209228363552767 0.497600109377776 0.794588806237986
1552880_at 0.284671187376391 0.0773918736530499 0.780749115483299 0.925631093582275
1552890_a_at 0.553553289496552 0.159321841185551 0.590049862258494 0.843112650956703
1552908_at -0.0602453245143458 -0.0419105269279472 0.952951964924069 0.986168806421442
1552910_at 1.95460643985278 0.414769900117312 0.0743284859937991 0.463170615825349
1552921_a_at 0.716048281256909 0.14984478625087 0.487662478314335 0.78966445074134
1552928_s_at 1.61882905553504 0.285783384690512 0.13144986383246 0.536570009213347
1552930_at 1.9985919308841 0.911711504341413 0.0688248077977867 0.454907806094225
1552931_a_at -0.589570086854032 -0.141732724694547 0.566414051816702 0.832113955931935
1552935_at 2.57027997913638 0.291991886397923 0.0245329291866776 0.377038496354337
1552939_at -0.332910042775969 -0.145220371233614 0.744946266016234 0.909896937475558
1552946_at 0.0633360513426217 0.0280902549036832 0.950541698523828 0.985461714751467
1552947_x_at 0.557951391299721 0.19037259981398 0.587136263576173 0.841681164070295
1552953_a_at 0.0939879691538075 0.0153758518569633 0.926669809174443 0.978221123799332
1552954_at -1.15560929141699 -0.772582671153156 0.270332141755725 0.657549861946511
1552967_at 0.378029088280738 0.0409054066901535 0.712011113203164 0.897326886751332
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