Detailed Information

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Basic Information

The table below details the source and basic information of this item.

Title Content
iBAD ID iBAD_0000138
Karyotype Trisomy 21
Type DNA microarray
Diseases Down syndrome
Organism Homo sapiens
Tissue Fetus
Cell Line Amniotic fluid cells
Platform GPL570
Accession GSE16176
GEO Title Expression profiles of amniotic fluid from human fetuses with Down syndrome and euploid controls
PMID 19474297
Article Title Functional geNmic analysis of amniotic fluid cell-free mRNA suggests that oxidative stress is significant in Down syndrome fetuses
Author Slonim DK, Koide K, Johnson KL, Tantravahi U, Cowan JM, Jarrah Z, Bianchi DW
GEO Link https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE16176
Pub Link https://www.ncbi.nlm.nih.gov/pubmed/19474297
FTP Download ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE16nnn/GSE16176/
SRA Run Selector -
SRP -

Differentially Expressed Genes

The gene expression matrix, up- and down-regulated gene list are provided. Click the three following options to download the corresponding list.

ID Statistic DM P-value P-adj
1007_s_at -2.304292676 -0.655556131 0.050133761 0.903306349
117_at 0.291624649 0.139668682 0.77799248 0.957131232
121_at 1.412722065 0.429742266 0.19543853 0.903306349
1316_at 0.080954272 0.030954012 0.937466956 0.987900304
1320_at 0.91996353 0.287045721 0.384492454 0.903306349
1552256_a_at -0.588112781 -0.224634492 0.572680449 0.91900593
1552264_a_at -0.542328694 -0.155229254 0.60236752 0.924747139
1552266_at 0.540004022 0.264755355 0.603896845 0.925377092
1552274_at 0.967529281 0.256058349 0.361615185 0.903306349
1552275_s_at 0.402464874 0.130063584 0.697881653 0.946178171
1552276_a_at 1.211372783 0.402785094 0.260317829 0.903306349
1552277_a_at -1.71359574 -0.999263903 0.124953075 0.903306349
1552278_a_at -0.743036543 -0.255212648 0.478708772 0.909764202
1552283_s_at -1.167989073 -0.496806327 0.276438896 0.903306349
1552288_at -0.581986387 -0.262755207 0.576604462 0.919382555
1552291_at -0.157248669 -0.199582324 0.878945177 0.977031293
1552295_a_at -0.292045308 -0.095868072 0.777682284 0.957124928
1552296_at -0.381859349 -0.16710371 0.712509043 0.947407052
1552299_at -0.376275626 -0.394316852 0.716495025 0.947892242
1552301_a_at 1.019508782 0.281149526 0.337799309 0.903306349
1552302_at -0.598814394 -0.666860418 0.565862523 0.91900593
1552304_at -0.122916751 -0.073026465 0.90520489 0.98082051
1552306_at 0.756547731 0.327721669 0.471010928 0.909358692
1552311_a_at 0.689802679 0.243146957 0.509829294 0.911699263
1552319_a_at -0.193575114 -0.119015845 0.851333163 0.971784598
1552325_at -0.118764219 -0.070356432 0.9083902 0.981338197
1552326_a_at 0.563667854 0.350815785 0.588427553 0.921449038
1552329_at -0.821658355 -0.661157786 0.435073055 0.905424038
1552330_at -0.571985215 -0.460438611 0.583042775 0.920872566
1552334_at -0.40791347 -0.285164397 0.69403586 0.946087157
1552338_at 0.239537034 0.072100883 0.816712269 0.96495293
1552343_s_at 0.242838902 0.150737223 0.814240526 0.96460951
1552347_at -0.053704148 -0.023016711 0.958487765 0.992281701
1552348_at -0.109653051 -0.040558953 0.915385263 0.98304433
1552349_a_at -1.313713464 -0.416200585 0.225363456 0.903306349
1552354_at 0.477777936 0.1279463 0.645589924 0.934350884
1552360_a_at -1.001829939 -0.793093812 0.345761253 0.903306349
1552362_a_at 0.165646248 0.053014155 0.872544903 0.97627498
1552365_at 0.296756759 0.173697598 0.774210936 0.956785504
1552367_a_at -0.228471151 -0.075711724 0.825011839 0.967104773
1552383_at 1.022240359 0.393323189 0.336581747 0.903306349
1552389_at -0.660979187 -0.50757572 0.527198116 0.91392769
1552390_a_at -0.972715256 -0.82210399 0.359183703 0.903306349
1552394_a_at 0.315469784 0.127918103 0.760477392 0.955576702
1552395_at 1.944451474 0.66002758 0.087741033 0.903306349
1552398_a_at -0.347931418 -0.125357989 0.736869324 0.950491463
1552399_a_at -0.36130353 -0.096613447 0.727228401 0.949273426
1552405_at 0.74054145 0.190952255 0.480139278 0.909812808
1552408_at -0.067698126 -0.027425236 0.947687351 0.989999664
1552409_a_at 1.460357984 0.585912418 0.182319875 0.903306349
1552410_at -1.307907494 -0.631347344 0.22723432 0.903306349
1552411_at 2.148054998 0.521745694 0.063968803 0.903306349
1552414_at 0.226606357 0.116478594 0.826412802 0.967221022
1552415_a_at 0.99491463 0.242712982 0.348914333 0.903306349
1552418_at -0.43728681 -0.135450545 0.673467715 0.939991483
1552419_s_at 0.961333692 0.302147539 0.364536182 0.903306349
1552421_a_at 0.941417059 0.269611709 0.374045445 0.903306349
1552424_at -0.159753868 -0.05995085 0.877034807 0.976892927
1552426_a_at -1.375925336 -1.178071829 0.206131307 0.903306349
1552432_at 1.035629605 0.323386293 0.330662492 0.903306349
1552436_a_at 0.011641455 0.004447863 0.99099675 0.997496447
1552440_at 0.319499009 0.29866507 0.757531923 0.955094986
1552449_a_at 0.017180455 0.00992268 0.986713405 0.997309081
1552453_a_at 0.335802948 0.088935404 0.74565676 0.952607804
1552455_at 1.014399249 0.453346435 0.340085891 0.903306349
1552458_at -0.143041483 -0.037070198 0.889794628 0.977761016
1552463_at 1.59017014 0.624998332 0.150460316 0.903306349
1552466_x_at 1.139872026 0.516865225 0.287315476 0.903306349
1552467_at 1.215828819 0.402378529 0.258706817 0.903306349
1552468_a_at 0.233811737 0.136550691 0.821003325 0.965569487
1552470_a_at -0.397219399 -0.12744692 0.701592875 0.946342547
1552472_a_at 0.420900758 0.175148972 0.684907135 0.943297407
1552474_a_at 1.08834763 0.273696402 0.308139132 0.903306349
1552482_at 1.390025884 0.423848221 0.201975079 0.903306349
1552484_at -0.216837129 -0.066950653 0.833762827 0.969085235
1552491_at 0.628845814 0.170488957 0.546981466 0.916086843
1552493_s_at 0.869989488 0.291780993 0.409649649 0.903306349
1552498_at -1.735591631 -0.444521269 0.120851207 0.903306349
1552506_at 0.677577489 0.199176582 0.517152137 0.912078975
1552509_a_at 0.506676202 0.231574653 0.626048612 0.930739011
1552510_at -0.12359699 -0.03776436 0.904683266 0.98082051
1552511_a_at 2.757337666 2.222835028 0.024776451 0.903306349
1552516_a_at -0.004713509 -0.002066056 0.996354596 0.998642606
1552519_at 0.504728217 0.188033553 0.627356266 0.931018511
1552531_a_at -2.701698607 -1.260492083 0.027002917 0.903306349
1552535_at 1.333698136 0.409965508 0.219024023 0.903306349
1552538_a_at 2.193182049 0.732154446 0.059624435 0.903306349
1552540_s_at 1.175665246 0.323135497 0.273528432 0.903306349
1552543_a_at 0.255462971 0.094526305 0.804810924 0.962964799
1552544_at 0.551445046 0.198211053 0.596390398 0.922967576
1552558_a_at 0.573756521 0.186926864 0.581899565 0.920872566
1552562_at -0.032100972 -0.016982362 0.975177967 0.99591609
1552566_at -0.158612663 -0.06034386 0.877904942 0.976892927
1552570_at 1.19264491 0.382197947 0.267179469 0.903306349
1552576_at -0.228799586 -0.081769896 0.824765164 0.967104773
1552578_a_at 1.037144744 0.549943254 0.329997762 0.903306349
1552580_at 1.46972701 0.624637974 0.179833251 0.903306349
1552582_at 0.475919834 0.707891833 0.646856699 0.934405598
1552583_s_at 1.309214829 0.402462674 0.226811906 0.903306349
1552584_at 2.671768221 0.551256272 0.028284606 0.903306349
1552596_at 0.038585543 0.011326225 0.970166344 0.994149082
1552598_at 0.727409862 0.322262943 0.487713826 0.910167393
1552605_s_at 0.730453978 0.187230718 0.485951074 0.910167393
1552607_at 0.741564377 0.294129119 0.479552468 0.909764202
1552612_at -1.4818765 -1.364339484 0.176653522 0.903306349
1552613_s_at -1.009058194 -0.510685722 0.342488743 0.903306349
1552615_at 1.306127117 0.482910811 0.227810658 0.903306349
1552617_a_at -2.674328564 -1.138139805 0.028172567 0.903306349
1552618_at 1.885944037 0.414543454 0.096023421 0.903306349
1552619_a_at 0.322295176 0.131554984 0.755490322 0.954876025
1552620_at 0.095931165 0.036850256 0.925934804 0.985877152
1552621_at 0.604246013 0.416025082 0.562419983 0.918567344
1552622_s_at 0.171299737 0.117485507 0.868241643 0.975146798
1552625_a_at -0.680858421 -0.31973953 0.515180487 0.91196703
1552628_a_at 1.510420672 0.92871645 0.169379281 0.903306349
1552630_a_at 0.334981009 0.109072881 0.746253732 0.952693793
1552634_a_at -1.609632713 -1.21001233 0.146144243 0.903306349
1552639_at 2.120930036 0.905656589 0.066728528 0.903306349
1552641_s_at -0.097556712 -0.037655868 0.924684206 0.98568128
1552643_at 1.414747174 0.762032248 0.194864386 0.903306349
1552646_at -0.249653722 -0.195491746 0.809146052 0.963340946
1552648_a_at 1.168502239 0.369890407 0.276243542 0.903306349
1552649_a_at 1.141839703 0.411913235 0.286543218 0.903306349
1552652_at 0.763015322 0.37635529 0.467355148 0.909358692
1552656_s_at 0.964195063 0.348766024 0.363184963 0.903306349
1552663_a_at 1.057959714 0.431555258 0.320970296 0.903306349
1552664_at -0.563821844 -0.510688657 0.588327608 0.921440125
1552665_at -0.481385317 -0.24667841 0.643134079 0.934316832
1552667_a_at 0.151265256 0.05239331 0.883511294 0.977279936
1552670_a_at 0.595997862 0.240076916 0.567652389 0.91900593
1552676_at 0.912046594 0.332832618 0.388401192 0.903306349
1552685_a_at 4.453893074 0.7574469 0.002128259 0.903306349
1552687_a_at -0.36247007 -0.223398795 0.726389774 0.949273426
1552689_at 1.953009233 1.100906717 0.086588622 0.903306349
1552691_at 0.598612298 0.42605034 0.565990844 0.91900593
1552696_at 0.743970458 0.243020886 0.478174049 0.909764202
1552703_s_at 2.994522171 2.181780893 0.01721483 0.903306349
1552712_a_at 2.258772296 0.930817596 0.053825394 0.903306349
1552714_at -0.318466367 -0.102232856 0.758286412 0.95510461
1552719_at 1.487726798 0.895740738 0.175140317 0.903306349
1552726_at -1.002055965 -1.04435954 0.345658563 0.903306349
1552729_at 1.580795702 0.601862127 0.152580361 0.903306349
1552730_at -0.482459692 -0.224729091 0.642403562 0.934050674
1552735_at -0.617461333 -0.256501391 0.554094952 0.917560005
1552737_s_at 1.415776347 1.356491739 0.194573169 0.903306349
1552742_at 1.121509516 0.295623443 0.294603356 0.903306349
1552749_a_at 0.568243311 0.414039882 0.585461933 0.920933904
1552751_a_at 0.517529961 0.195512409 0.618788485 0.929102465
1552754_a_at 0.088660037 0.02555927 0.9315314 0.986595159
1552757_s_at -0.291796084 -0.100101658 0.777866058 0.957124928
1552758_at -1.255660945 -0.327180375 0.244670731 0.903306349
1552761_at 1.308399325 0.433242697 0.227075326 0.903306349
1552765_x_at 0.467290006 0.215195896 0.652756166 0.935504113
1552768_at 2.047583214 0.533338364 0.074788277 0.903306349
1552773_at 0.168223263 0.064863692 0.87058279 0.975608768
1552775_at 1.080229199 0.378049697 0.311526857 0.903306349
1552777_a_at 0.597254733 0.323740867 0.566853265 0.91900593
1552783_at -0.55792627 -0.2601304 0.592160727 0.922168854
1552787_at 2.329791772 1.362348044 0.048177347 0.903306349
1552791_a_at 1.282343779 0.969255599 0.235629652 0.903306349
1552793_at 0.962799333 0.517461601 0.363843596 0.903306349
1552797_s_at 0.066351007 0.064764271 0.948726582 0.99003747
1552799_at -0.455590402 -0.164514222 0.660795801 0.937204897
1552800_at 0.379191509 0.127493999 0.714412337 0.947763717
1552806_a_at 0.99162565 0.354380433 0.35042161 0.903306349
1552812_a_at 0.064282001 0.016653863 0.950322912 0.990265829
1552813_at -0.889298657 -0.577005162 0.399792929 0.903306349
1552816_at -0.292886123 -0.073084391 0.777062387 0.957124928
1552825_at 1.353684549 0.715387414 0.212837673 0.903306349
1552834_at 0.795972796 0.251842822 0.449019955 0.906896058
1552841_s_at 0.744188906 0.290630815 0.478049031 0.909764202
1552842_at 0.316271038 0.082318022 0.759891322 0.955384863
1552845_at 1.139526941 0.589500263 0.287451085 0.903306349
1552846_s_at -0.003211157 -0.000959259 0.997516502 0.999236421
1552848_a_at 0.702729434 0.207670584 0.50215723 0.911169831
1552853_at 0.811346585 0.253613086 0.440635994 0.905424038
1552856_at 0.508968006 0.19370047 0.624511959 0.930337904
1552857_a_at 1.422916639 0.32735709 0.192563222 0.903306349
1552860_at 1.300335069 0.362833557 0.229694255 0.903306349
1552868_at 0.524816045 0.185181384 0.61393958 0.928072464
1552873_s_at 2.867631112 0.774519339 0.020904857 0.903306349
1552876_at 0.966235731 0.334251443 0.362223594 0.903306349
1552884_at -0.290508683 -0.097152557 0.778815607 0.957260978
1552892_at 1.068464711 0.406294152 0.316488044 0.903306349
1552895_a_at 0.089614865 0.045366241 0.930796229 0.986390415
1552898_a_at -0.424891589 -0.191340086 0.682112931 0.94221852
1552902_a_at -0.122043646 -0.039663183 0.905874478 0.98082051
1552903_at 0.904006799 0.215088542 0.392400132 0.903306349
1552908_at 0.824947455 0.293853894 0.433308905 0.905424038
1552910_at 1.804685875 0.943143626 0.108771049 0.903306349
1552911_at 0.061960563 0.023017175 0.952114289 0.99083974
1552914_a_at 0.590539681 0.217389123 0.5711302 0.91900593
1552915_at 0.39076462 0.286130232 0.706171402 0.946684821
1552917_at -0.250265246 -0.083205597 0.808689371 0.963233155
1552922_at 0.992667072 0.301945946 0.349943813 0.903306349
1552923_a_at -0.525354888 -0.24466379 0.613581775 0.928019495
1552930_at 0.145522448 0.047782466 0.887898163 0.97759382
1552932_at 0.323475719 0.084950952 0.75462897 0.954807654
1552933_at 0.133083291 0.053815523 0.897414201 0.980075989
1552937_s_at 0.231400693 0.063770923 0.822812311 0.966673858
1552944_a_at -0.003293439 -0.000963353 0.997452866 0.999209331
1552946_at -0.175954748 -0.167865499 0.864701892 0.974582301
1552948_at 1.304194498 0.336240215 0.228437687 0.903306349
1552953_a_at -0.686946887 -0.294037689 0.511534075 0.911911693
1552954_at 1.340492656 0.359368438 0.216903808 0.903306349
1552957_at 2.749429148 0.79748388 0.025081039 0.903306349
1552961_at 1.301771529 0.497086123 0.229225882 0.903306349
1552967_at -0.50307195 -0.24244025 0.628469198 0.931174561
1552973_at 0.689652779 0.250655435 0.509918689 0.911699263
1552974_at 0.219505082 0.11139555 0.83175379 0.968578444
1552976_at 1.43394935 0.448355004 0.189493429 0.903306349
1552977_a_at 0.522455969 0.269364132 0.615508021 0.928280161
1552979_at 1.079103162 0.402306869 0.31199905 0.903306349
1552980_at 1.138327516 0.378084237 0.287922828 0.903306349
1552986_at 2.402457287 0.825833736 0.043011477 0.903306349
1552993_at -0.36271073 -0.152857473 0.726216812 0.949273426
1552997_a_at 1.262178232 0.336214991 0.242435946 0.903306349
1552998_at 1.878712459 0.84045782 0.097097612 0.903306349
1552999_a_at 0.266836203 0.12846181 0.796344601 0.961146821
1553006_at 1.350514267 0.517875347 0.213808805 0.903306349
1553009_s_at 0.544546611 0.264720731 0.600910374 0.924387996
1553022_at 0.631710505 0.159412093 0.545200036 0.915742891
1553025_at -0.9006906 -0.416499335 0.39405826 0.903306349
1553027_a_at 0.827862256 0.247608114 0.431749657 0.905424038
1553034_at -1.600927861 -0.599291183 0.148060502 0.903306349
1553041_at 1.111979738 0.6961155 0.298443634 0.903306349
1553042_a_at 0.199450006 0.078822585 0.846886941 0.971063811
1553043_a_at -0.891396632 -0.310587315 0.398732323 0.903306349
1553046_s_at 1.013577751 0.301918387 0.340454626 0.903306349
1553048_a_at -0.00597695 -0.001601809 0.995377469 0.998483282
1553055_a_at 0.29613856 0.130936318 0.774666113 0.956785504
1553057_at 0.417687297 0.219971559 0.687160819 0.944097789
1553061_at 0.640686534 0.169613708 0.539640607 0.915742891
1553063_at 0.888804189 0.264001646 0.400043196 0.903306349
1553064_at 1.880393817 0.426071883 0.096846842 0.903306349
1553067_a_at -0.136388873 -0.048077961 0.894883616 0.979190223
1553070_a_at -0.020580794 -0.007954797 0.984084118 0.997046526
1553071_a_at 1.250298117 0.390376778 0.246522587 0.903306349
1553077_at 0.750942267 0.224892885 0.474194625 0.909358692
1553078_at 0.900008188 0.337548744 0.394400101 0.903306349
1553079_at -0.453844108 -0.135132684 0.661999869 0.937501145
1553081_at 0.477337693 0.193573278 0.645889952 0.934350884
1553082_at 0.354619661 0.11487312 0.732040957 0.949738133
1553083_at 0.866996333 0.428512296 0.411192931 0.903306349
1553087_at 0.824764611 0.281210409 0.433406846 0.905424038
1553089_a_at 1.109944019 0.364281097 0.299269142 0.903306349
1553093_a_at 2.215372502 0.555324764 0.05759635 0.903306349
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